MRI BIOPHYSICS GROUP

bridging the micro-macro gap with diffusion MRI

Software

Our group is committed on contributing developed software to the scientific community by making it freely available on Github, and the open source proiect MRTRIX.

Artifact correction

The correction of the different types of artifacts (Gibss ringing, EPI distortions, eddy current distortion, motion, etc) as well as noise is necessary for an accurate, precise and robust estimation of diffusion model parameters. We are currently developing DESIGNER (Diffusion parameter EStImation with Gibbs and NoisE Removal), a postprocessing pipeline for diffusion MRI images, which includes following preprocessing steps:

Diffusion parameter estimation

Any questions regarding our code? Email us at meso@diffusion-mri.com .

 

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